Motif Explorer Search Report

Reference: Generalized Suffix Trees for Biological Sequence Data: Applications and Implementation , Bieganski et al., HICSS-27, 1994.

Query expression:

G[ACG]GATC>

Search result summary

3 distinct fragments in 3718 entries located

Unique matching fragment summary

Fragment #  1:    6 bp. in 2081 entries: GAGATC
Fragment #  2:    6 bp. in  541 entries: GCGATC
Fragment #  3:    6 bp. in 1096 entries: GGGATC

Matches

 B86TP    :  330 bp., match:  325..330 , ...ACGNA<GCGATC>    
 104O22T7 :  526 bp., match:  521..526 , ...TNTTC<GGGATC>    
 105D2T7  :  335 bp., match:  330..335 , ...NTNNG<GGGATC>
Copyright (c) 1994-95, Paul Bieganski
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