Latest RI Map of all Five Chromosomes - Text version
Chromosome 1
Markers Distance Cumulative 1 RS10 3.8 0.00 2 ve001 0.0 3.8 3 PVV4 0.0 3.8 4 nga59 0.0 3.8 5 ACC2 3.2 3.8 6 O846A 0.5 7.0 7 A32 0.5 7.5 8 agp16 0.5 8.0 9 ve002 0.0 8.5 10 SEP4E 0.0 8.5 11 A1 1.1 8.5 12 ATEAT1 2.2 9.6 13 g4715a 0.0 11.8 14 m488 0.0 11.8 15 ve003 0.0 11.8 16 ve004 0.0 11.8 17 agp102 0.0 11.8 18 mi372 1.6 11.8 19 po 1.6 13.4 20 GT45_1 0.0 15.0 21 PAI1 1.6 15.0 22 apx1A 2.0 16.6 23 cSOD 0.7 18.6 24 mi100 0.3 19.3 25 phyA 0.3 19.6 26 m241A 0.0 19.9 27 nga63 0.0 19.9 28 mi443 0.3 19.9 29 hma2 0.3 20.2 30 ve005 0.6 20.5 31 CDs14 2.2 21.1 32 pC1 0.0 23.3 33 NCC1 0.0 23.3 34 ATTS0477 0.6 23.3 35 agp20e 4.1 23.9 36 CDs7 0.0 28.0 37 ve006 1.4 28.0 38 pC2 1.4 29.4 39 O818 0.6 30.8 40 EG17G9 1.1 31.4 41 g3786 1.0 32.5 42 ve007 2.6 33.5 43 mi348 1.0 36.1 44 mi113 0.3 37.1 45 Y3 0.3 37.4 46 ve036 3.8 37.7 47 wak1 2.7 41.5 48 pFNR 8.3 44.2 49 CAT3 4.1 52.5 50 pC3 0.0 56.6 51 mi203 0.6 56.6 52 JD1110 0.6 57.2 53 g3829 2.5 57.8 54 DHS3 2.5 60.3 55 m235 4.0 62.8 56 ve037 3.2 66.8 57 mi265 0.3 70.0 58 CEG1 0.3 70.3 59 mi163 1.1 70.6 60 ve095 2.3 71.7 61 R64 0.8 74.0 62 ve008 0.0 74.8 63 L3 0.3 74.8 64 ve094 0.3 75.1 65 mi62 0.0 75.4 66 mi15 0.0 75.4 67 mi111 0.0 75.4 68 mi192 1.0 75.4 69 nga248 0.0 76.4 70 mi116 2.7 76.4 71 I42 0.1 79.1 72 CDs12 2.0 79.2 73 CATTS039 3.2 81.2 74 ACBP 2.8 84.4 75 UFO 3.4 87.2 76 ve009 0.3 90.6 77 P39B2T7 0.3 90.9 78 m254A 0.5 91.2 79 m253 1.1 91.7 80 ve010 1.7 92.8 81 mi423a 1.1 94.5 82 AIG1 0.6 95.6 83 RPS18B 1.6 96.2 84 mi63 1.0 97.8 85 mi19 0.0 98.8 86 agp6e 1.0 98.8 87 mi342 3.5 99.8 88 intel1_1 1.7 103.3 89 EKRIV 0.7 105.0 90 EKRIII 0.0 105.7 91 mi133 0.0 105.7 92 GAPB 2.3 105.7 93 mi72 0.0 108.0 94 GRF2 2.0 108.0 95 GRF4 7.3 110.0 96 GRF1 5.1 117.3 97 mi291a 1.4 122.4 98 mi441 0.7 123.8 99 mi208 0.0 124.5 100 agp25b 1.1 124.5 101 mi106 0.0 125.6 102 JD4818 1.0 125.6 103 p4 2.7 126.6 104 m213 1.6 129.3 105 MYAC 1.6 130.9 106 RL6 1.0 132.5 107 spl4 0.0 133.5 108 PAP240 2.5 133.5 109 Lox1 0.6 136.0 110 mi209 0.1 136.6 111 nga128 0.1 136.7 112 nga280 0.1 136.8 113 hma1 0.1 136.9 114 ANUK41 0.1 137.0 115 M81A7T7 0.0 137.1 116 mi303 0.5 137.1 117 CDs10 1.4 137.6 118 B34 0.7 139.0 119 FD 0.0 139.7 120 mi259 0.0 139.7 121 mi408 0.0 139.7 122 mi230 0.0 139.7 123 mi304 0.5 139.7 124 g4026 1.5 140.2 125 agp1e 1.0 141.7 126 ATHGENEA 1.1 142.7 127 AS33 1.0 143.8 128 mi324 0.0 144.8 129 mi353 0.0 144.8 130 MW1 1.7 144.8 131 mi424 0.0 146.5 132 GT13_1 3.6 146.5 133 cyp86 4.4 150.1 134 TOPP3 3.7 154.5 135 m315 4.9 158.2 136 mi185 0.2 163.1 137 mi193 0.3 163.3 138 CDs8 2.1 163.6 139 pCITf117 0.6 165.7 140 g4552 4.6 166.3 141 G39h2 3.7 170.9 142 Athb13 1.8 174.6 143 Tag1 0.3 176.4 144 SBG9 0.4 176.7 145 c12 0.3 177.1 146 mi462 1.0 177.4 147 mi103 0.5 178.4 148 PKNAT_22 0.0 178.9 149 m453A 2.1 178.9 150 PAB5 1.1 181.0 151 nga111 2.5 182.1 152 z13G 0.0 184.6 153 mi425 0.0 184.6 154 PR5 1.4 184.6 155 I6 0.7 186.0 156 m532 0.0 186.7 157 ATHATPAS 0.0 186.7 158 pPC8.94 0.4 186.7 159 ADH 0.4 187.1 160 petE 0.5 187.5 161 DHA 1.3 188.0 162 ve011 0.0 189.3 163 agp15e 1.0 189.3 164 agp64 2.6 190.3 165 ve043 0.5 192.9 166 m132A 0.0 193.4 167 mi157 1.2 193.4 168 g17311 10.0 194.6 169 pAtT32CX ---------- 204.6 169 markers log-likelihood= -646.65
Chromosome 2
Markers Distance Cumulative 170 Tel2N 0.0 0.0 171 NOR2 0.1 0.0 172 RNS1 10.4 0.1 173 ve012 2.2 10.5 174 mi320 0.8 12.7 175 AtGST2B 0.6 13.5 176 m246 2.6 14.1 177 m497A 0.9 16.7 178 g4553 3.6 17.6 179 ve013 0.0 21.2 180 CDs3 0.0 21.2 181 mi310 0.2 21.2 182 EKRII 0.2 21.4 183 EKRII_C 0.2 21.6 184 mi444 0.0 21.8 185 mi421 0.6 21.8 186 g4532 2.7 22.4 187 SEP2A 1.1 25.1 188 g4133 3.0 26.2 189 PR1 2.6 29.2 190 mi398 4.1 31.8 191 B33 0.0 35.9 192 m216 1.7 35.9 193 mi139 1.1 37.6 194 mi148 0.0 38.7 195 agp2e 2.7 38.7 196 mi238 0.1 41.4 197 pGC1 0.2 41.5 198 A9031HR 0.2 41.7 199 m251 0.0 41.9 200 O802F 6.4 41.9 201 g6842 0.0 48.3 202 GPA1 2.9 48.3 203 B68 0.0 51.2 204 er 6.1 51.2 205 pGC2 1.0 57.3 206 mi54 0.0 58.3 207 CDs9 1.0 58.3 208 ve014 0.5 59.3 209 m220 1.8 59.8 210 m283C 1.9 61.6 211 ve096 1.7 63.5 212 SEP5B 0.0 65.2 213 ASP1 2.5 65.2 214 alr1 0.4 67.7 215 PR21 2.1 68.1 216 ve015 0.0 70.2 217 spl3 0.2 70.2 218 DsG1 0.2 70.4 219 F9 0.2 70.6 220 mi277 0.3 70.8 221 z9Y 0.3 71.1 222 m323 0.0 71.4 223 g17288 0.0 71.4 224 ve016 1.6 71.4 225 um579B 0.0 73.0 226 ve017 0.3 73.0 227 sam3 0.3 73.3 228 ve018 2.8 73.6 229 pPOD9 3.0 76.4 230 O5841 0.0 79.4 231 nga168 0.9 79.4 232 g14382 1.7 80.3 233 BHB 0.0 82.0 234 LTP 0.4 82.0 235 A45 0.5 82.4 236 TOPP4 0.0 82.9 237 g4514 0.0 82.9 238 m429 3.7 82.9 239 m336 2.6 86.6 240 ve019 0.6 89.2 241 mi473 1.5 89.8 242 AtGST6 0.0 91.3 243 mi79a 0.0 91.3 244 mi455 2.1 91.3 245 pAtT51 2.8 93.4 246 SG5 1.6 96.2 247 Athb7 4.3 97.8 248 GLU2 ---------- 102.1 79 markers log-likelihood= -319.00
Chromosome 3
Markers Distance Cumulative 249 CA1 1.6 0.0 250 Athb3 0.6 1.6 251 nga32 0.0 2.2 252 CDs6 0.0 2.2 253 mi74b 0.0 2.2 254 CDs15 1.0 2.2 255 mi199 0.0 3.2 256 nga172 1.5 3.2 257 GAPC 0.0 4.7 258 mi172 5.3 4.7 259 g4523 0.8 10.0 260 m583 0.4 10.8 261 gmc1 0.4 11.2 262 CR16 0.4 11.6 263 CMs4 0.1 12.0 264 mi403 0.0 12.1 265 mi355 1.9 12.1 266 mi467 0.6 14.0 267 mi357 0.3 14.6 268 nga126 0.4 14.9 269 apx1B 1.3 15.3 270 JGB3 2.6 16.6 271 mi207 0.2 19.2 272 MS2 0.3 19.4 273 ATHCHIB 0.0 19.7 274 ghc1 0.0 19.7 275 Ds408_3a 2.0 19.7 276 nga162 2.1 21.7 277 ve039 0.5 23.8 278 mi289 0.1 24.3 279 GT51_1 0.2 24.4 280 MMR 0.2 24.6 281 g4708 0.0 24.8 282 m228 1.0 24.8 283 mi339 0.0 25.8 284 MSH2 0.6 25.8 285 agp14e 5.6 26.4 286 sAt2105b 2.7 32.0 287 m560B2 0.0 34.7 288 O4023 1.9 34.7 289 m105 0.6 36.6 290 mi142 1.3 37.2 291 PAP606 1.0 38.5 292 AtDMC1 0.8 39.5 293 mi268 5.8 40.3 294 mi386 1.2 46.1 295 mi225 0.5 47.3 296 MMR2 0.6 47.8 297 g4711 7.5 48.4 298 PAP86 4.5 55.9 299 mi287 0.0 60.4 300 mi178 1.0 60.4 301 GAPA 1.0 61.4 302 ve020 0.0 62.4 303 um579C 3.5 62.4 304 B52 1.8 65.9 305 GL1 3.6 67.7 306 AIG2 0.0 71.3 307 mi413 1.7 71.3 308 atpox 0.9 73.0 309 mi358 0.3 73.9 310 EKRI_B 0.3 74.2 311 mi79b 3.3 74.5 312 a_1 3.3 77.8 313 ve021 2.7 81.1 314 TOPP5 0.7 83.8 315 ASN1 0.7 84.5 316 g4117 0.0 85.2 317 m249 5.5 85.2 318 O97B1 7.1 90.7 319 I18 1.4 97.8 320 g4564b 3.5 99.2 321 g4014 1.0 102.7 322 b5 2.3 103.7 323 AtPK41A 0.0 106.0 324 CDs4 1.1 106.0 325 m457 0.5 107.1 326 mi456 0.0 107.6 327 R30 5.7 107.6 328 PF3H0.7 1.2 113.3 329 TSA1 4.0 114.5 330 t94 1.5 118.5 331 SG1 0.7 120.0 332 Scr 0.0 120.7 333 ve022 1.6 120.7 334 ve042 2.1 122.3 335 spl5 0.6 124.4 336 AT103 0.5 125.0 337 g2778 0.0 125.5 338 BGL1 3.6 125.5 339 spl1 4.1 129.1 340 m424 0.6 133.2 341 agp29 1.0 133.8 342 nga6 2.2 134.8 343 nga112 16.9 137.0 344 tai224 ---------- 153.9 96 markers log-likelihood= -444.64
Chromosome 4
Markers Distance Cumulative 345 Tel4N 0.0 0.0 346 NOR4 1.1 0.0 347 BIO217 0.0 1.1 348 mi51 3.2 1.1 349 mi204 0.5 4.3 350 mi122 1.6 4.8 351 g3843 0.7 6.4 352 I41G 1.4 7.1 353 mi301 2.0 8.5 354 CMs2 0.0 10.5 355 CMs5 0.0 10.5 356 mi390 0.0 10.5 357 TWN1 0.0 10.5 358 ve023 0.7 10.5 359 GT148 2.4 11.2 360 app 2.7 13.6 361 AtGST2A 2.1 16.3 362 GA1 2.0 18.4 363 Gsl_ohp 4.1 20.4 364 petC 0.0 24.5 365 CDs13 0.5 24.5 366 m448A 0.0 25.0 367 mi233 0.5 25.0 368 g2616 0.0 25.5 369 mi306 0.0 25.5 370 m506 0.5 25.5 371 nga12 1.0 26.0 372 EKRI_A 0.0 27.0 373 mi87 0.0 27.0 374 m456A 0.5 27.0 375 mi167 0.5 27.5 376 BIO200 1.6 28.0 377 C11Ath 4.1 29.6 378 nga8 3.0 33.7 379 RPS18C 0.5 36.7 380 pCITf3 1.5 37.2 381 H2761 0.0 38.7 382 m518A 5.4 38.7 383 BIO206 2.3 44.1 384 AGL19 0.0 46.4 385 pCITd23 3.2 46.4 386 g4108 2.4 49.6 387 mi465 1.9 52.0 388 MET2 1.09 53.9 389 mi128 2.2 55.8 390 pCC19 1.1 58.0 391 g6837 0.0 59.1 392 g2620 0.3 59.1 393 SHcyH_1 0.2 59.4 394 mi30 0.5 59.6 395 mi279 0.5 60.1 396 CD34_4 0.5 60.6 397 g10086 0.0 61.1 398 g4564a 1.0 61.1 399 ve024 0.0 62.1 400 m326 0.5 62.1 401 mi198 2.1 62.6 402 mi260 2.6 64.7 403 C18a 0.0 67.3 404 m226 0.0 67.3 405 RPp5 0.2 67.3 406 g13683 0.3 67.5 407 g4539 0.5 67.8 408 mi112 0.0 68.3 409 mi330 0.5 68.3 410 g3845 2.2 68.8 411 mi32 2.2 71.0 412 AG 1.3 73.2 413 CDs2 0.6 74.5 414 g19838 0.0 75.1 415 pCITd71 0.0 75.1 416 g3883 0.0 75.1 417 IRT1 1.9 75.1 418 ATLML1 1.1 77.0 419 JGB9 1.6 78.1 420 agp21e 1.6 79.7 421 mi422 3.4 81.3 422 A20 3.5 84.7 423 YAP230 3.0 88.2 424 mi475 1.1 91.2 425 agp66 0.3 92.3 426 AGL24 0.3 92.6 427 SEP2B 0.8 92.9 428 m600 0.3 93.7 429 PG11 0.4 94.0 430 DD1 0.0 94.4 431 mi123 0.6 94.4 432 RPS2 1.7 95.0 433 WU95 1.2 96.7 434 AIM1 1.8 97.9 435 RLK5 0.0 99.7 436 mi232 2.2 99.7 437 PRHA 1.0 101.9 438 CDs11 1.2 102.9 439 g8300 1.3 104.1 440 mi431 1.0 105.4 441 O6455 0.0 106.4 442 pCITd104 0.0 106.4 443 g3088 3.2 106.4 444 CAT2 2.7 109.6 445 fah1 2.6 112.3 446 pCITd99 0.0 114.9 447 pCITd76 4.4 114.9 448 m214 0.0 119.3 449 B41 3.9 119.3 450 AP2 0.3 123.2 451 z6Y 0.3 123.5 452 PAP72 2.7 123.8 453 CDs1 6.1 126.5 454 g2486 2.1 132.6 455 ve025 0.0 134.7 456 pFS6.5_3 2.2 134.7 457 um596A 3.0 136.9 458 ve031 3.0 139.9 459 g3713 0.0 142.9 460 DHS1 0.0 142.9 461 mi369 10.6 142.9 462 SAUR ---------- 153.5 118 markers log-likelihood= -497.34
Chromosome 5
Markers Distance Cumulative 463 PDC1 2.0 0.0 464 BHB2 2.2 2.0 465 O5629 3.2 4.2 466 g3715 0.0 7.4 467 um515D 2.9 7.4 468 ctr1 1.9 10.3 469 GLU1 0.0 12.2 470 nga225 0.0 12.2 471 mi121 2.1 12.2 472 O6569 0.0 14.3 473 ASA1 2.4 14.3 474 nga158 1.8 16.7 475 m217 0.5 18.5 476 g3837 0.5 19.0 477 YAP169 2.1 19.5 478 mi97 0.0 21.6 479 RO2 1.5 21.6 480 KG31 3.2 23.1 481 agp4e 2.1 26.3 482 Amyc1 0.0 28.4 483 nga249 1.1 28.4 484 ve033 0.6 29.5 485 ASN3 0.6 30.1 486 ASP3 0.6 30.7 487 CDs5 2.6 31.3 488 P104a 1.3 33.9 489 ca72 0.5 35.2 490 mi174 0.0 35.7 491 CHS 0.0 35.7 492 nga151 3.2 35.7 493 p5cr 3.2 38.9 494 nga106 0.0 42.1 495 mi322 0.0 42.1 496 GDH1 0.0 42.1 497 mi438 0.0 42.1 498 alr3 2.8 42.1 499 ASP2 2.1 44.9 500 agp25a 0.5 47.0 501 ve026 0.0 47.5 502 C1 0.8 47.5 503 g4560 0.9 48.3 504 TSL 2.0 49.2 505 mi138 2.8 51.2 506 mi433 0.5 54.0 507 mi90 2.2 54.5 508 CR12 0.0 56.7 509 m291 1.2 56.7 510 GslbutAr 0.0 57.9 511 Moco1 7.5 57.9 512 g4556 2.9 65.4 513 D4 1.1 68.3 514 nga139 4.3 69.4 515 g4715b 0.1 73.7 516 B3 3.2 73.8 517 mi219 0.0 77.0 518 g6843 0.0 77.0 519 AF3 2.5 77.0 520 Tn139 5.4 79.5 521 CATTS026 0.0 84.9 522 mi125 1.9 84.9 523 TOPP8 3.3 86.8 524 um579D 2.0 90.1 525 nga76 0.5 92.1 526 mi291b 1.6 92.6 527 CMs1 0.5 94.2 528 phyC 0.5 94.7 529 mi137 5.3 95.2 530 PR5K 5.3 100.5 531 GRF3 0.0 105.8 532 EKRI_C 8.4 105.8 533 CATTS019 0.5 114.2 534 mi323 0.5 114.7 535 do 0.5 115.2 536 m247 2.6 115.7 537 VBVBC10 3.7 118.3 538 CR3 3.6 122.0 539 g4028 3.3 125.6 540 DFR 2.2 128.9 541 C42 1.0 131.1 542 mi194 0.0 132.1 543 TRX3 1.0 132.1 544 spl2 1.3 133.1 545 TOPP6 1.3 134.4 546 agp6 0.5 135.7 547 mi83 0.5 136.2 548 PAP548 3.2 136.7 549 mi61 0.5 139.9 550 mi423b 3.8 140.4 551 ve027 3.1 144.2 552 g2400 0.0 147.3 553 g13698 0.0 147.3 554 mi271 0.5 147.3 555 mi2 1.4 147.8 556 nga129 2.9 149.2 557 PAP3 3.2 152.1 558 m435 1.4 155.3 559 m233 1.8 156.7 560 PDC2 4.6 158.5 561 m558A 1.3 163.1 562 mi69 1.1 164.4 563 mi70 0.0 165.5 564 mi74a 0.0 165.5 565 mi184 0.0 165.5 566 mi418 1.3 165.5 567 agp50 0.0 166.8 568 g3791 2.6 166.8 569 SEP5A 0.0 169.4 570 TOPP2 3.5 169.4 571 FC20G4T7 2.2 172.9 572 R250 7.2 175.1 573 emb514 5.9 182.3 574 LFY3 1.4 188.2 575 m211A 3.1 189.6 576 agp27e 1.1 192.7 577 agp11e 0.1 193.8 578 GSA1 1.1 193.9 579 ve032 2.4 195.0 580 g2368 1.0 197.4 581 ve028 0.1 198.4 582 ASN2 1.9 198.5 583 pHJ5 4.2 200.4 584 ES724A_ 1.0 204.6 585 m555 2.1 205.6 586 a5 0.0 207.7 587 mi335 0.5 207.7 588 AtPK41B 1.6 208.2 589 petH2 0.0 209.8 590 CATHHANK 2.6 209.8 591 BIO205 2.6 212.4 592 CD34_2 ---------- 215.0 130 markers log-likelihood= -651.28