Table 3. YAC clones identified in this region  

 
Marker YAC clone 

 

Size of YAC
Identification route
Comments
4111 EG17A3 - Lib Chimerica
4111 EG19E1 145 Lib  
4111 yUP22C11 110 S  
4111 yUP6D6 250 S  
4111 yUP7A1 320 S  
4111, PI EG17E4 155 Col  
4111, PI yUP3B11 490 S  
4111, PI, RI3F12, yUP7B5 290 S  
PI EG10B4 - Col  
PI EG21H10 - Col  
PI EG21H9 - Col  
PI EW22D1 - Col  
PI EW2C9 - Col  
PI EW2D9 - Col  
PI EW3B1 - Col Chimerica
PI, 4560 EG14B7 140 Col EW14B7 not 
probed with 
RI3F12
PI , RI3F12, 4560, TSL CIC6B10 780 Col (RI3F12) 
Col (PI), 
S (4560), 
Col(TSL), 
CIC6B10 not 
probed with 4111
PI, RI3F12, 4560, TSL CIC5B2 490 S (RI3F12), 
S (PI), 
S (4560), 
Col(TSL), 
 
RI3F12, 4560,TSL CIC5C2 625 + 505 Col (RI3F12) 
Col (PI), 
S (4560), 
Col(TSL), 
No signal with RI9B3 although possibly expected based on size, however double YAC insert present
RI3F12, 4560, TSL, RI9B3, 
RI8B11
CIC3F12 615 S (RI3F12), 
Col (PI), 
Col(4560), Col(TSL), S(RI9B3), S(RI8B11)
 
4560 EW20F9 115 S  
4560 EG12H12 75 S Chimerica,c
4560 EG7H2 175 + 185 S Chimerica,c
4560 EG7G2 175 + 185 S Chimerica,c
4560 yUP12F9 275 S Chimericb,c
4560 yUP14C2 95 S Chimericb
4560 yUP23E9 - S  
4560 yUP24C2 130 S  
4560,TSL EW16D2 160  
4560,TSL EW19D10 160 S (4560), 
Col (TSL
 
4560,TSL CIC7F9 380 S(4560), 
Col (TSL)
 
4560,TSL yUP8A11 275 S Chimericb
TSL EG15G3 160 Col  
TSL EG8B7 150 S  
TSL EW7G6 110 Col  
TSL yUP24B7 305 S  
TSL yUP8E11 305 S  
TSL yUP7F10 270 Col  
TSL, RI9B3 CIC9B3 405 S  
RI9B3 EG8F12 - S Chimerica
RI9B3 yUP1A8 - S  
RI9B3, RI8B11 CIC7E11 360 S  
RI9B3, RI8B11 EW11E10 - S  
RI9B3, RI8B11 EW13C7 - S  
RI9B3, RI8B11 yUP14A9 70 S  
RI9B3, RI8B11 yUP3D9 40 S  
RI8B11,pCIT718,21503,KG10, 4556 CIC8B11 1030 S (RI8B11), 
Col (21503), 
Col (KG10), 
Col (4556)
 
pCIT718 yUP12C7 - Col  
pCIT718 yUP19C9 290 Col  
pCIT718 EG11B5 - Col  
pCIT718 EG20C4 - Col  
pCIT718 EW12C4 - Col  
pCIT718 EW12C5 - Col  
pCIT718 EW19E12 200 Col  
pCIT718 yUP4G4 260 Col  
pCIT718, KG10 yUP6F5 600 Col chimericb
no hybridisation 
with 21503
21503 EG19F5 125 S  
21503 EG1F4 180 S Chimerica
21503 EG12B7 - Col  
21503 EW13G9 - Col  
21503 EW19B2 - Col  
21503 EG4F3 - Col  
21503 EG1G3/ 
EG1G4/ 
EG1G5
125 S EG1G5 chimerica, identical clones 
due to past library cross-contamination
21503,KG10, 4556 CIC4D4 670 Col  
KG10 yUP4C10 280 S  
KG10 yUP5D4 310 S  
KG10 EG12B7 - Col  
KG10 EW13G9 - Col  
KG10 EW19B2 - Col  
KG10 EG4F3 - Col  
4556 EG20H9 140 S chimerica

Chimeric clones identified:
    a = Schmidt et al (1994)
    b = Dunn (1996)
    c = Morroll and Wilson (in prep)

S = Southern hybridisation
Col = low density colony blot
Lib = high density library screen