NASC Stock Detail Page
NASC ID: N573104
Name: SALK_073104
ABRC stock number: SALK_073104
Description: Sequence-indexed T-DNA insertion line generated by vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2; kanamycin was employed for selection of plants carrying a T-DNA (please note that in many lines, the kan resistance trait has been cosuppressed, so that insertion plants may not be kanamycin resistant); each T1 transformant has been maintained individually at SALK; the DNA sequence of each T-DNA flanking region was generated from seedlings grown from the same sample of seeds as that provided for distribution (T3). NOTE: kanamycin resistance gene may be silenced; PCR- or hybridization-based segregation analysis is required to confirm presence of insertion; may be segregating for phenotypes that are not linked to the insertion; may have additional insertions potentially segregating. Please cite the Alonso et al. reference linked to this stock and acknowledge NASC/ABRC for distributing the seeds in all presentations and publications utilizing this material. June 2002 TAIR gene annotation - MTG10.18 L300-5'. At5g62150. Single, segregating flank-tagged T3-generation T-DNA lines generated by vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2. Associated Polymorphisms: SALKseq_073104.1 : Genbank Annotation 2015-02-18 - This genomic-terminal sequence of a TDNA insertion region lies within the CDS of AT1G01600.1 (at chr 1 pos 219283 (C/219283-219338) on the TAIR10). The sequences' 1-56 bps mapped on the genome, 58-78 bps onto the T-DNA. Pools P 49, R 45, C 47 N 49. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO343072. SALKseq_073104.2 : Genbank Annotation 2015-02-18 - This genomic-terminal sequence of a TDNA insertion region lies within the CDS of AT2G35710.1 (at chr 2 pos 15013128 (W/15013059-15013128) on the TAIR10). The sequences' 1-70 bps mapped on the genome. Pools P 49, R 45, C 47 N 49. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO346414. SALKseq_073104.3 : Genbank Annotation 2015-02-18 - This genomic-terminal sequence of a TDNA insertion region lies within the Intergenic between AT2G45540.2=P355 and AT2G45550.1 (at chr 2 pos 18773528 (W/18773480-18773528) on the TAIR10). The sequences' 1-49 bps mapped on the genome, 60-78 bps onto the T-DNA. Pools P 49, R 45, C 47 N 49. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO349762. SALKseq_073104.4 : Genbank Annotation 2015-02-18 -This genomic-terminal sequence of a TDNA insertion region lies within the Intergenic between AT3G56870.1=UTR3 and AT3G56880.1=P355 (at chr 3 pos 21056635 (W/21056590-21056635) on the TAIR10). The sequences' 1-47 bps mapped on the genome, 58-78 bps onto the T-DNA. Pools P 49, R 45, C 47 N 49. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO353116.
Donation Date: 2002-01-06
| Donated by: | The Salk Institute for Biological Studies Joseph R. Ecker |
Donor Number: SALK_073104
Part of : SALK lines
Stock type: individual line
Material type: seed
Comment: Homozygous/confirmed line: SALK_073104C.
| Status | Price (£) |
|---|---|
| Available | £11.00 |
Germplasm Info
Mutagen: ema
Background: Col-0 (N60000)
Segregation status: segregating
Transformation method: Vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2
Associated Polymorphisms
When available, select a locus to display it at the AIP or view the EMBL record at the EBI.
| Gene: | Allele: | Locus: | AGI code: |
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References
Alonso, J.M. et al. 2003. Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science 301(5633):653-7.PubMed ID: 12893945.