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Verification of the CAUT lines

CAUT lines

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    • Parental line

    Name Background Description NASC code
    ch-42 Ler yellow T-DNA tagged allele obtained by
    Koncz (1990 EMBO Journal 9 1337-1346)    		 N58076

    Chromosome 1

    Line/Marker clone name method BAC Position NASC code
            cM bp x 10-6  
    L112 L112-e sequencing F13M7 7 1.4 N58000
    B143 - BAC F25P2 15   N58001
    L64 L64-b sequencing F28G4 20 6.0 N58002
    L133 L133-3 sequencing T10F20 22 6.3 N58003
    12F FUR12F12 L&D - 40   N58004
    L131 L131-h sequencing F3M18 43 10.0 N58005
    L54 L54-d sequencing F3C3 50 11.6 N58006
    C456 C456-6 L&D - 56   N58007
    C450 - BAC F17K3 57 12.9 N58008
    centromere
    		sequencing   58

    L58 L58-e sequencing F11A17 69 17.4 N58009
    I6 I6-1 sequencing F12M16 75 19.8 N58010
    L107 L107-d sequencing T30E16 84 21.6 N58011
    L10 L10-3 sequencing F16M19 87 23.0 N58012
    E1(2)3 E1(2)3 BAC F16P17 91 22.4 N58013
    97F - sequencing F22C12 92 22.9 N58014
    C460 - BAC F9L18 95 24.2 N58015
    C447   MM   100   N58016
    L84 L84-2 sequencing F23O10 103 25.7 N58017
    L121 L121-b sequencing F5A18 109 26.3 N58018
    24A1 24-A1-17 BAC F28P22 110 26.6 N58019
    L71 L71-i sequencing F10I7 112 27.6 N58020
    C381 - BAC F14G6 114 27.8 N58021
    L98 L98-m sequencing T32E1 119 28.9 N58022
    4B   sequencing F23A5 121 29.1 N58023

    Chromosome 2

    Line/Marker clone name method BAC Position NASC code
            cM bp x 10-6  
    centromere   sequencing   19    
    C425 C425 L&D; seq T24I21 33 7.2 N58024
    15E   sequencing MJB20 33 7.5 N58025
    L59 L59-b sequencing F5H14 39 8.9 N58026
    30B4 FUR30-2 L&D; seq T16B14 40 9.3 N58027
    L124 L124-f sequencing F23F1 59 12.7 N58028
    L40 L40-14 sequencing T9H9 63 13.4 N58029
    L95 L95-d sequencing F3G5 70 15.7 N58030
    7F - sequencing MHK10 77 17.5 N58031

    Chromosome 3

    Line/Marker clone name method BAC Position NASC code
            cM bp x 10-6  
    L117 L117-8 sequencing F28J7 1 0.3 N58032
    I7 I7-x L&D; seq F10A16 15 1.7 N58033
    26D 26D2 BAC F27D23 16 3.3 N58034
    A1-4 A1-4 sequencing F10A3 25 7.6 N58035
    C413   sequencing MLM24 33 8.3 N58036
    L72 L72-4 sequencing MFE16 40 9.7 N58037
    centromere   sequencing   55    
    L129 L129-af sequencing F7K15 58 15.2 N58038
    L43 L43-2 sequencing T20E23 68 18.8 N58039
    77B   BAC F7E13   18.5 N58040
    16B F16b L&D; seq T20E23   18.7 N58041
    25-12 F25-12.2 L&D;seq F1I16 75 20.6 N58042
    L55 L55-a sequencing F21F14 81 22.9 N58043
    C320   BAC F17L17 95 21.1 N58044

    Chromosome 4

    Line/Marker clone name method BAC Position NASC code
            cM bp x 10-6  
    L140 L140-c sequencing T18A10 5 0.3 N58045
    A23 FurA23_7 L&D;seq F5K24 23 3.5 N58046
    centromere   sequencing   24    
    L104 L104-a sequencing T15G18 25 4.9 N58048
    A35   L&D;seq T15F16 26 4.3 N58049
    L118 L118-2 L&D;seq T1P17 40 6.4 N58050
    19D   BAC F21E15 46 10.7 N58051
    26F   BAC F16D17 55 11.9 N58052
    80F FUR80F3 L&D   58   N58053
    L79 L79-1 sequencing F17L22 63 10.4 N58054
    A20 a20_4 L&D   65   N58055
    B7   BAC F18C17 67 12.3 N58056
    L4 L4-e sequencing M3E9 75 12.4 N58057
    C311 C311-6 sequencing F26P21 80 14.8 N58058
    L105 L105-d sequencing F10M10 82 15.4 N58059
    A41   L&D;seq F15J1 86 15.8 N58060
    L29 L29-q sequencing T19K4 86 16.0 N58061
    C307 C307_1 L&D;seq T5J17 110 17.5 N58062

    Chromosome 5

    Line/Marker clone name method BAC Position NASC code
            cM bp x 10-6  
    B124 B124-1 sequencing F17C15 7 0.9 N58063
    L6 L6-1 sequencing F32M21 11 1.3 N58064
    L110 L110-1 sequencing F15M7 15 2.0 N58065
    L128 L128-6 sequencing MBK20 20 2.4 N58066
    C344 FurC344_7 L&D; seq F17I14 25 2.9 N58067
    71B4   BAC F5H2 26   N58068
    L100 L100-3 sequencing T5K6 26 3.5 N58069
    L90 L90-2 sequencing F2I11 26 3.6 N58070
    L18 L18-6 sequencing MQM1 43 7.9 N58071
    centromere   sequencing   70    
    B111 B111-5 BAC F25B22 98 18.4 N58072
    L82 L82-u sequencing K21P3 103 19.7 N58073
    69B Fur69B12 L&D;seq K14B18 115 23.6 N58074
    L101 L101-d sequencing MUD21 131 26.4 N58075